FragPipe:用于运行 MSFragger 和 Philosopher 的跨平台图形用户界面 (GUI) - 用于全面分析霰弹枪蛋白质组学数据的管道

上传者: 42101720 | 上传时间: 2023-10-02 23:18:51 | 文件大小: 19.35MB | 文件类型: ZIP
FragPipe 是一套计算工具的 Java 图形用户界面 (GUI),能够对基于质谱的蛋白质组学数据进行综合分析。 它由提供- 一种适用于常规和“开放”(宽前体质量耐受性)肽识别的超快蛋白质组学搜索引擎。 FragPipe 包括工具包,用于 MSFragger 搜索结果(PeptideProphet、iProphet、ProteinProphet)的下游后处理、FDR 过滤、基于标签的量化和多实验总结报告生成。 和以帮助解释开放搜索结果。 FragPipe 二进制文件中还包括用于基于 TMT/iTRAQ 同量异位标记量化的 、用于具有运行间匹配 (MBR) 功能的无标签量化的 、SpectraST 和 EasyPQP 谱库构建模块以及 DIA-Umpire SE 模块用于直接分析数据独立采集 (DIA) 数据。 FragPipe 教程 (涵盖所有 FragPipe 模块的通用教程)

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