[{"title":"( 46 个子文件 142KB ) bcalm:低内存中的压缩de Bruijn图构造","children":[{"title":"bcalm-master","children":[{"title":".circleci","children":[{"title":"config.yml <span style='color:#111;'> 2.62KB </span>","children":null,"spread":false}],"spread":true},{"title":"CMakeLists.txt <span style='color:#111;'> 4.32KB </span>","children":null,"spread":false},{"title":".gitignore <span style='color:#111;'> 7B </span>","children":null,"spread":false},{"title":"README.md <span style='color:#111;'> 5.19KB </span>","children":null,"spread":false},{"title":".gitmodules <span style='color:#111;'> 83B </span>","children":null,"spread":false},{"title":"test","children":[{"title":"simple_test.sh <span style='color:#111;'> 640B </span>","children":null,"spread":false},{"title":"minitip.fa <span style='color:#111;'> 374B </span>","children":null,"spread":false}],"spread":true},{"title":"LICENSE <span style='color:#111;'> 1.08KB </span>","children":null,"spread":false},{"title":"gatb-core","children":null,"spread":false},{"title":"thirdparty","children":[{"title":"ThreadPool.h <span style='color:#111;'> 2.87KB </span>","children":null,"spread":false},{"title":"lockstdqueue.h <span style='color:#111;'> 1.03KB </span>","children":null,"spread":false},{"title":"lockstdvector.h <span style='color:#111;'> 1.28KB </span>","children":null,"spread":false},{"title":"lockbasedqueue.h <span style='color:#111;'> 2.45KB </span>","children":null,"spread":false},{"title":"concurrentqueue.h <span style='color:#111;'> 139.15KB </span>","children":null,"spread":false}],"spread":true},{"title":"src","children":[{"title":"main.cpp <span style='color:#111;'> 1.77KB </span>","children":null,"spread":false},{"title":"bcalm_1.cpp <span style='color:#111;'> 3.89KB </span>","children":null,"spread":false},{"title":"bcalm_1.hpp <span style='color:#111;'> 1.79KB </span>","children":null,"spread":false}],"spread":true},{"title":"scripts","children":[{"title":"convertToGFA.py <span style='color:#111;'> 5.43KB </span>","children":null,"spread":false},{"title":"memused <span style='color:#111;'> 318B </span>","children":null,"spread":false},{"title":"abundance_stats.py <span style='color:#111;'> 1.43KB </span>","children":null,"spread":false},{"title":"pufferize.py <span style='color:#111;'> 5.53KB </span>","children":null,"spread":false},{"title":"split_unitigs.py <span style='color:#111;'> 4.37KB </span>","children":null,"spread":false},{"title":"unitigEvaluator.cpp <span style='color:#111;'> 6.35KB </span>","children":null,"spread":false},{"title":"release.sh <span style='color:#111;'> 69B </span>","children":null,"spread":false}],"spread":true},{"title":"example","children":[{"title":"run-tiny.sh <span style='color:#111;'> 128B </span>","children":null,"spread":false},{"title":"tiny_read.fa <span style='color:#111;'> 31B </span>","children":null,"spread":false},{"title":"uf","children":[{"title":"testUF.cpp <span style='color:#111;'> 1.76KB </span>","children":null,"spread":false},{"title":"Makefile <span style='color:#111;'> 92B </span>","children":null,"spread":false}],"spread":false},{"title":"pufferize","children":[{"title":"refs.fa <span style='color:#111;'> 197B </span>","children":null,"spread":false},{"title":"run.sh <span style='color:#111;'> 138B </span>","children":null,"spread":false}],"spread":false},{"title":"circular_unitigs_unittests","children":[{"title":"test2.fa <span style='color:#111;'> 37B </span>","children":null,"spread":false},{"title":"test3.fa <span style='color:#111;'> 134B </span>","children":null,"spread":false},{"title":"README <span style='color:#111;'> 79B </span>","children":null,"spread":false},{"title":"CMD <span style='color:#111;'> 214B </span>","children":null,"spread":false},{"title":"test1.fa <span style='color:#111;'> 97B </span>","children":null,"spread":false}],"spread":false}],"spread":true},{"title":".travis.yml <span style='color:#111;'> 1.07KB </span>","children":null,"spread":false},{"title":"VERSION <span style='color:#111;'> 7B </span>","children":null,"spread":false},{"title":"bidirected-graphs-in-bcalm2","children":[{"title":"bidirected-graphs-in-bcalm2.md <span style='color:#111;'> 10.55KB </span>","children":null,"spread":false},{"title":"fig4.png <span style='color:#111;'> 1.48KB </span>","children":null,"spread":false},{"title":"fig5.png <span style='color:#111;'> 4.13KB </span>","children":null,"spread":false},{"title":"fig8.png <span style='color:#111;'> 17.06KB </span>","children":null,"spread":false},{"title":"fig1.png <span style='color:#111;'> 2.22KB </span>","children":null,"spread":false},{"title":"figs.pptx <span style='color:#111;'> 44.32KB </span>","children":null,"spread":false},{"title":"fig33.png <span style='color:#111;'> 9.84KB </span>","children":null,"spread":false},{"title":"fig66.png <span style='color:#111;'> 3.42KB </span>","children":null,"spread":false},{"title":"fig2.png <span style='color:#111;'> 3.92KB </span>","children":null,"spread":false},{"title":"fig7.png <span style='color:#111;'> 7.53KB </span>","children":null,"spread":false}],"spread":false}],"spread":false}],"spread":true}]