fithic:Fit-Hi-C是一种工具,可用于为通过全基因组基因组架构测定(例如Hi-C)产生的染色体接触图分配统计置信度估计值

上传者: 42139429 | 上传时间: 2022-05-16 19:24:52 | 文件大小: 44.56MB | 文件类型: ZIP
FitHiC和FitHiC2 Fit-Hi-C(或FitHiC)最初由Ferhat Ay,Timothy Bailey和William Noble于2014年1月19日开发。目前由Ferhat Ay(ferhatay @ lji)进行维护和更新。 .org)和Arya Kaul(akaul @ lji (.org)在拉荷亚变态React和免疫学研究所的中。 当前版本被命名为FitHiC2 (或FitHiC 2.0 ),因为与 FitHiC 相比增加了许多新功能,例如: 发现染色体间的显着相互作用, 应用合并过滤器算法过滤掉假定的旁观者相互作用,并仅保留直接CIS染色体相互作用, 报告相互作用的 bin 对之间的预期接触计数,以及原始(观察到的)接触计数,以评估从预期接触计数中观察到的丰富度。 请使用来讨论/错误报告/分析问题。 发送电子邮件至 fithic@googlegrou

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