jumboDB:大k的De Bruijn图构造

[{"title":"（ 41 个子文件 70KB ） jumboDB:大k的De Bruijn图构造","children":[{"title":"jumboDB-main","children":[{"title":"manual.md <span style='color:#111;'> 3.50KB </span>","children":null,"spread":false},{"title":"_config.yml <span style='color:#111;'> 26B </span>","children":null,"spread":false},{"title":"LICENSE <span style='color:#111;'> 1.61KB </span>","children":null,"spread":false},{"title":"src","children":[{"title":"tools","children":[{"title":"sequences","children":[{"title":"stream.hpp <span style='color:#111;'> 7.10KB </span>","children":null,"spread":false},{"title":"nucl.hpp <span style='color:#111;'> 2.71KB </span>","children":null,"spread":false},{"title":"contigs.hpp <span style='color:#111;'> 5.94KB </span>","children":null,"spread":false},{"title":"verify.hpp <span style='color:#111;'> 1.01KB </span>","children":null,"spread":false},{"title":"sequence.hpp <span style='color:#111;'> 10.94KB </span>","children":null,"spread":false},{"title":"seqio.hpp <span style='color:#111;'> 7.78KB </span>","children":null,"spread":false},{"title":"IntrusiveRefCntPtr.h <span style='color:#111;'> 9.18KB </span>","children":null,"spread":false},{"title":"CMakeLists.txt <span style='color:#111;'> 211B </span>","children":null,"spread":false},{"title":"contigs.cpp <span style='color:#111;'> 111B </span>","children":null,"spread":false}],"spread":true},{"title":"common","children":[{"title":"string_utils.hpp <span style='color:#111;'> 2.30KB </span>","children":null,"spread":false},{"title":"cl_parser.hpp <span style='color:#111;'> 2.00KB </span>","children":null,"spread":false},{"title":"simple_computation.hpp <span style='color:#111;'> 795B </span>","children":null,"spread":false},{"title":"bloom_filter.hpp <span style='color:#111;'> 21.49KB </span>","children":null,"spread":false},{"title":"zip_utils.hpp <span style='color:#111;'> 925B </span>","children":null,"spread":false},{"title":"oneline_utils.hpp <span style='color:#111;'> 1.37KB </span>","children":null,"spread":false},{"title":"output_utils.hpp <span style='color:#111;'> 941B </span>","children":null,"spread":false},{"title":"CMakeLists.txt <span style='color:#111;'> 217B </span>","children":null,"spread":false},{"title":"omp_utils.hpp <span style='color:#111;'> 9.63KB </span>","children":null,"spread":false},{"title":"logging.hpp <span style='color:#111;'> 5.69KB </span>","children":null,"spread":false},{"title":"dir_utils.hpp <span style='color:#111;'> 753B </span>","children":null,"spread":false},{"title":"cl_parser.cpp <span style='color:#111;'> 2.84KB </span>","children":null,"spread":false}],"spread":false},{"title":"CMakeLists.txt <span style='color:#111;'> 53B </span>","children":null,"spread":false}],"spread":true},{"title":"projects","children":[{"title":"dbg","children":[{"title":"dbg_construction.hpp <span style='color:#111;'> 7.54KB </span>","children":null,"spread":false},{"title":"dbg_disjointigs.hpp <span style='color:#111;'> 11.32KB </span>","children":null,"spread":false},{"title":"rolling_hash.hpp <span style='color:#111;'> 5.92KB </span>","children":null,"spread":false},{"title":"dbg.cpp <span style='color:#111;'> 16.97KB </span>","children":null,"spread":false},{"title":"hash_utils.hpp <span style='color:#111;'> 1.68KB </span>","children":null,"spread":false},{"title":"sparse_dbg.hpp <span style='color:#111;'> 79.41KB </span>","children":null,"spread":false},{"title":"compact_path.hpp <span style='color:#111;'> 15.92KB </span>","children":null,"spread":false},{"title":"CMakeLists.txt <span style='color:#111;'> 149B </span>","children":null,"spread":false},{"title":"sparse_simplification.hpp <span style='color:#111;'> 2.14KB </span>","children":null,"spread":false},{"title":"initial_correction.hpp <span style='color:#111;'> 24.34KB </span>","children":null,"spread":false},{"title":"minimizer_selection.hpp <span style='color:#111;'> 2.13KB </span>","children":null,"spread":false}],"spread":false},{"title":"CMakeLists.txt <span style='color:#111;'> 23B </span>","children":null,"spread":false}],"spread":true}],"spread":true},{"title":".gitignore <span style='color:#111;'> 140B </span>","children":null,"spread":false},{"title":"test_data","children":[{"title":"reads.fasta <span style='color:#111;'> 223B </span>","children":null,"spread":false}],"spread":true},{"title":"CMakeLists.txt <span style='color:#111;'> 1018B </span>","children":null,"spread":false},{"title":"README.md <span style='color:#111;'> 1.59KB </span>","children":null,"spread":false}],"spread":true}],"spread":true}]