首页 DeepBindToKeras:将DeepBind模型转换为Keras

DeepBindToKeras:将DeepBind模型转换为Keras

上传者： 42166105 | 上传时间： 2023-02-17 11:51:22 | 文件大小： 10.75MB | 文件类型： ZIP
C
DeepBindToKeras Av在这里。 我编写了将DeepBind模型转换为Keras的代码。 这有点痛苦，但是我对结果感到满意。 一些不错的功能：与原始的DeepBind预测代码一样，如果该模型适用于DNA序列，那么我将自动取正向和反向互补序列的最大值。 我还处理了具有隐藏的完全连接层和平均池的模型的情况（某些RNA模型存在平均池）。 注意事项： Keras要求批次中的所有输入都具有相同的长度（批次之间的输入长度可以不同，但​​是在批次内，长度必须相同）。 因此，我的转换代码要求您指定输入长度。 当输入大小为<= int（conv_filter_length * 1.5）时，输出在数值精度上与DeepBind输出完全相同（我使用DeepBind附带的4个示例序列和4个模型进行了比较） 当输入大小> int（conv_filter_length * 1.5）时，输出是相

文件下载

资源详情

[{"title":"（ 940 个子文件 10.75MB ） DeepBindToKeras:将DeepBind模型转换为Keras","children":[{"title":"deepbind <span style='color:#111;'> 23.16KB </span>","children":null,"spread":false},{"title":"example.seq <span style='color:#111;'> 124B </span>","children":null,"spread":false},{"title":"db <span style='color:#111;'> 18B </span>","children":null,"spread":false},{"title":"deepbind.c <span style='color:#111;'> 24.33KB </span>","children":null,"spread":false},{"title":"makefile <span style='color:#111;'> 172B </span>","children":null,"spread":false},{"title":"README.TXT <span style='color:#111;'> 2.85KB </span>","children":null,"spread":false},{"title":"example.ids <span style='color:#111;'> 120B </span>","children":null,"spread":false},{"title":".DS_Store <span style='color:#111;'> 6.00KB </span>","children":null,"spread":false},{"title":"db.tsv <span style='color:#111;'> 518.61KB </span>","children":null,"spread":false},{"title":"D00117.002.txt <span style='color:#111;'> 34.60KB </span>","children":null,"spread":false},{"title":"D00555.002.txt <span style='color:#111;'> 30.49KB </span>","children":null,"spread":false},{"title":"D00494.002.txt <span style='color:#111;'> 21.39KB </span>","children":null,"spread":false},{"title":"D00748.001.txt <span style='color:#111;'> 34.66KB </span>","children":null,"spread":false},{"title":"D00023.001.txt <span style='color:#111;'> 25.97KB </span>","children":null,"spread":false},{"title":"D00647.002.txt <span style='color:#111;'> 30.79KB </span>","children":null,"spread":false},{"title":"D00221.001.txt <span style='color:#111;'> 34.58KB </span>","children":null,"spread":false},{"title":"D00133.001.txt <span style='color:#111;'> 17.64KB </span>","children":null,"spread":false},{"title":"D00162.001.txt <span style='color:#111;'> 17.64KB </span>","children":null,"spread":false},{"title":"D00416.005.txt <span style='color:#111;'> 21.42KB </span>","children":null,"spread":false},{"title":"D00596.005.txt <span style='color:#111;'> 30.48KB </span>","children":null,"spread":false},{"title":"D00268.001.txt <span style='color:#111;'> 34.62KB </span>","children":null,"spread":false},{"title":"D00389.005.txt <span style='color:#111;'> 21.58KB </span>","children":null,"spread":false},{"title":"D00689.003.txt <span style='color:#111;'> 30.44KB </span>","children":null,"spread":false},{"title":"D00652.003.txt <span style='color:#111;'> 21.72KB </span>","children":null,"spread":false},{"title":"D00058.001.txt <span style='color:#111;'> 26.14KB </span>","children":null,"spread":false},{"title":"D00299.003.txt <span style='color:#111;'> 34.59KB </span>","children":null,"spread":false},{"title":"D00403.001.txt <span style='color:#111;'> 21.41KB </span>","children":null,"spread":false},{"title":"D00705.003.txt <span style='color:#111;'> 34.61KB </span>","children":null,"spread":false},{"title":"D00351.001.txt <span style='color:#111;'> 30.63KB </span>","children":null,"spread":false},{"title":"D00165.001.txt <span style='color:#111;'> 34.55KB </span>","children":null,"spread":false},{"title":"D00439.003.txt <span style='color:#111;'> 30.38KB </span>","children":null,"spread":false},{"title":"D00109.001.txt <span style='color:#111;'> 34.57KB </span>","children":null,"spread":false},{"title":"D00781.003.txt <span style='color:#111;'> 25.75KB </span>","children":null,"spread":false},{"title":"D00815.001.txt <span style='color:#111;'> 34.65KB </span>","children":null,"spread":false},{"title":"D00208.001.txt <span style='color:#111;'> 34.56KB </span>","children":null,"spread":false},{"title":"D00173.001.txt <span style='color:#111;'> 17.63KB </span>","children":null,"spread":false},{"title":"D00728.002.txt <span style='color:#111;'> 21.57KB </span>","children":null,"spread":false},{"title":"D00505.003.txt <span style='color:#111;'> 21.66KB </span>","children":null,"spread":false},{"title":"D00150.001.txt <span style='color:#111;'> 17.63KB </span>","children":null,"spread":false},{"title":"D00122.003.txt <span style='color:#111;'> 34.61KB </span>","children":null,"spread":false},{"title":"D00690.003.txt <span style='color:#111;'> 21.55KB </span>","children":null,"spread":false},{"title":"D00757.001.txt <span style='color:#111;'> 25.58KB </span>","children":null,"spread":false},{"title":"D00807.001.txt <span style='color:#111;'> 25.69KB </span>","children":null,"spread":false},{"title":"D00052.002.txt <span style='color:#111;'> 26.04KB </span>","children":null,"spread":false},{"title":"D00201.001.txt <span style='color:#111;'> 34.65KB </span>","children":null,"spread":false},{"title":"D00552.006.txt <span style='color:#111;'> 25.57KB </span>","children":null,"spread":false},{"title":"D00387.001.txt <span style='color:#111;'> 30.51KB </span>","children":null,"spread":false},{"title":"D00111.001.txt <span style='color:#111;'> 17.65KB </span>","children":null,"spread":false},{"title":"D00326.002.txt <span style='color:#111;'> 21.69KB </span>","children":null,"spread":false},{"title":"D00275.001.txt <span style='color:#111;'> 17.63KB </span>","children":null,"spread":false},{"title":"D00681.002.txt <span style='color:#111;'> 21.66KB </span>","children":null,"spread":false},{"title":"D00279.001.txt <span style='color:#111;'> 34.59KB </span>","children":null,"spread":false},{"title":"D00619.007.txt <span style='color:#111;'> 25.63KB </span>","children":null,"spread":false},{"title":"D00565.002.txt <span style='color:#111;'> 34.70KB </span>","children":null,"spread":false},{"title":"D00205.001.txt <span style='color:#111;'> 34.61KB </span>","children":null,"spread":false},{"title":"D00470.005.txt <span style='color:#111;'> 21.51KB </span>","children":null,"spread":false},{"title":"D00653.003.txt <span style='color:#111;'> 21.39KB </span>","children":null,"spread":false},{"title":"D00406.002.txt <span style='color:#111;'> 21.45KB </span>","children":null,"spread":false},{"title":"D00407.003.txt <span style='color:#111;'> 25.78KB </span>","children":null,"spread":false},{"title":"D00558.002.txt <span style='color:#111;'> 30.42KB </span>","children":null,"spread":false},{"title":"D00267.001.txt <span style='color:#111;'> 34.63KB </span>","children":null,"spread":false},{"title":"D00447.002.txt <span style='color:#111;'> 30.48KB </span>","children":null,"spread":false},{"title":"D00414.003.txt <span style='color:#111;'> 30.51KB </span>","children":null,"spread":false},{"title":"D00263.001.txt <span style='color:#111;'> 34.54KB </span>","children":null,"spread":false},{"title":"D00262.001.txt <span style='color:#111;'> 34.67KB </span>","children":null,"spread":false},{"title":"D00549.002.txt <span style='color:#111;'> 34.62KB </span>","children":null,"spread":false},{"title":"D00319.003.txt <span style='color:#111;'> 21.48KB </span>","children":null,"spread":false},{"title":"D00125.001.txt <span style='color:#111;'> 34.51KB </span>","children":null,"spread":false},{"title":"D00128.004.txt <span style='color:#111;'> 17.68KB </span>","children":null,"spread":false},{"title":"D00458.003.txt <span style='color:#111;'> 21.51KB </span>","children":null,"spread":false},{"title":"D00219.001.txt <span style='color:#111;'> 17.66KB </span>","children":null,"spread":false},{"title":"D00685.003.txt <span style='color:#111;'> 30.71KB </span>","children":null,"spread":false},{"title":"D00636.003.txt <span style='color:#111;'> 30.74KB </span>","children":null,"spread":false},{"title":"D00291.002.txt <span style='color:#111;'> 30.37KB </span>","children":null,"spread":false},{"title":"D00360.007.txt <span style='color:#111;'> 25.70KB </span>","children":null,"spread":false},{"title":"D00501.003.txt <span style='color:#111;'> 21.42KB </span>","children":null,"spread":false},{"title":"D00554.003.txt <span style='color:#111;'> 34.50KB </span>","children":null,"spread":false},{"title":"D00590.001.txt <span style='color:#111;'> 30.51KB </span>","children":null,"spread":false},{"title":"D00344.005.txt <span style='color:#111;'> 25.60KB </span>","children":null,"spread":false},{"title":"D00492.003.txt <span style='color:#111;'> 30.65KB </span>","children":null,"spread":false},{"title":"D00700.001.txt <span style='color:#111;'> 30.62KB </span>","children":null,"spread":false},{"title":"D00204.001.txt <span style='color:#111;'> 34.66KB </span>","children":null,"spread":false},{"title":"D00643.002.txt <span style='color:#111;'> 21.67KB </span>","children":null,"spread":false},{"title":"D00644.003.txt <span style='color:#111;'> 42.97KB </span>","children":null,"spread":false},{"title":"D00320.001.txt <span style='color:#111;'> 21.48KB </span>","children":null,"spread":false},{"title":"D00378.007.txt <span style='color:#111;'> 21.53KB </span>","children":null,"spread":false},{"title":"D00485.004.txt <span style='color:#111;'> 21.57KB </span>","children":null,"spread":false},{"title":"D00380.002.txt <span style='color:#111;'> 30.39KB </span>","children":null,"spread":false},{"title":"D00641.002.txt <span style='color:#111;'> 30.70KB </span>","children":null,"spread":false},{"title":"D00323.002.txt <span style='color:#111;'> 21.53KB </span>","children":null,"spread":false},{"title":"D00322.002.txt <span style='color:#111;'> 21.47KB </span>","children":null,"spread":false},{"title":"D00118.002.txt <span style='color:#111;'> 34.61KB </span>","children":null,"spread":false},{"title":"D00577.002.txt <span style='color:#111;'> 21.60KB </span>","children":null,"spread":false},{"title":"D00645.006.txt <span style='color:#111;'> 21.57KB </span>","children":null,"spread":false},{"title":"D00472.003.txt <span style='color:#111;'> 30.57KB </span>","children":null,"spread":false},{"title":"D00481.003.txt <span style='color:#111;'> 25.79KB </span>","children":null,"spread":false},{"title":"D00169.001.txt <span style='color:#111;'> 34.58KB </span>","children":null,"spread":false},{"title":"D00269.001.txt <span style='color:#111;'> 34.67KB </span>","children":null,"spread":false},{"title":"D00411.003.txt <span style='color:#111;'> 30.39KB </span>","children":null,"spread":false},{"title":"D00192.001.txt <span style='color:#111;'> 34.58KB </span>","children":null,"spread":false},{"title":"......","children":null,"spread":false},{"title":"<span style='color:steelblue;'>文件过多，未全部展示</span>","children":null,"spread":false}],"spread":true}]

评论信息

其他资源

免责申明

【只为小站】的资源来自网友分享，仅供学习研究，请务必在下载后24小时内给予删除，不得用于其他任何用途，否则后果自负。基于互联网的特殊性，【只为小站】 无法对用户传输的作品、信息、内容的权属或合法性、合规性、真实性、科学性、完整权、有效性等进行实质审查；无论 【只为小站】 经营者是否已进行审查，用户均应自行承担因其传输的作品、信息、内容而可能或已经产生的侵权或权属纠纷等法律责任。
本站所有资源不代表本站的观点或立场，基于网友分享，根据中国法律《信息网络传播权保护条例》第二十二条之规定，若资源存在侵权或相关问题请联系本站客服人员，zhiweidada#qq.com，请把#换成@，本站将给予最大的支持与配合，做到及时反馈和处理。关于更多版权及免责申明参见 版权及免责申明

个人信息

下载历史

相关资源标签

热门下载

最新下载