CNVnator:用于通过映射读取从覆盖深度发现CNV和进行基因分型的工具

上传者: 42123191 | 上传时间: 2024-06-05 22:47:17 | 文件大小: 71.79MB | 文件类型: ZIP
自述文件 快速入门指南 # Extract read mapping $ ./cnvnator -root file.root -tree file.bam -chrom 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16\ 17 18 19 20 21 22 X Y OR $ ./cnvnator -root file.root -tree file.bam -chrom $(seq 1 22) X Y OR $ ./cnvnator -root file.root -tree file.bam -chrom chr1 chr2 chr3 chr4 chr5 chr6 chr7 chr8\ chr9 chr10 chr11 chr12 chr13 chr14 chr15 chr16 chr17 chr18 chr19 chr20 chr21 chr22

文件下载

资源详情

[{"title":"( 42 个子文件 71.79MB ) CNVnator:用于通过映射读取从覆盖深度发现CNV和进行基因分型的工具","children":[{"title":"CNVnator-master","children":[{"title":"EXOnator.hh <span style='color:#111;'> 1.19KB </span>","children":null,"spread":false},{"title":"Visualizer.cpp <span style='color:#111;'> 13.24KB </span>","children":null,"spread":false},{"title":"Visualizer.hh <span style='color:#111;'> 1.61KB </span>","children":null,"spread":false},{"title":"CITATION <span style='color:#111;'> 937B </span>","children":null,"spread":false},{"title":"ExampleData","children":[{"title":"1KG.20160622.strict_mask.hg38_GRCh38.fa.gz.fai <span style='color:#111;'> 762B </span>","children":null,"spread":false},{"title":"1KG.20160622.strict_mask.hg38_GRCh38.fa.gz <span style='color:#111;'> 37.80MB </span>","children":null,"spread":false},{"title":"1KG.20141020.strict_mask.hg19_GRCh37.fa.gz.gzi <span style='color:#111;'> 755.79KB </span>","children":null,"spread":false},{"title":"README <span style='color:#111;'> 549B </span>","children":null,"spread":false},{"title":"1KG.20160622.strict_mask.hg38_GRCh38.fa.gz.gzi <span style='color:#111;'> 753.98KB </span>","children":null,"spread":false},{"title":"1KG.20141020.strict_mask.hg19_GRCh37.fa.gz.fai <span style='color:#111;'> 690B </span>","children":null,"spread":false},{"title":"1KG.20141020.strict_mask.hg19_GRCh37.fa.gz <span style='color:#111;'> 42.65MB </span>","children":null,"spread":false}],"spread":true},{"title":"HisMaker.cpp <span style='color:#111;'> 184.96KB </span>","children":null,"spread":false},{"title":"VcfParser.cpp <span style='color:#111;'> 2.77KB </span>","children":null,"spread":false},{"title":"plotrdbaf.py <span style='color:#111;'> 4.96KB </span>","children":null,"spread":false},{"title":"AliParser.hh <span style='color:#111;'> 3.07KB </span>","children":null,"spread":false},{"title":"Interval.hh <span style='color:#111;'> 1.04KB </span>","children":null,"spread":false},{"title":"Genome.hh <span style='color:#111;'> 954B </span>","children":null,"spread":false},{"title":"pytools","children":[{"title":"io.py <span style='color:#111;'> 5.36KB </span>","children":null,"spread":false},{"title":"__init__.py <span style='color:#111;'> 25B </span>","children":null,"spread":false}],"spread":true},{"title":"cnvnator.cpp <span style='color:#111;'> 17.10KB </span>","children":null,"spread":false},{"title":"plotcircular.py <span style='color:#111;'> 3.58KB </span>","children":null,"spread":false},{"title":"Dockerfile <span style='color:#111;'> 1.04KB </span>","children":null,"spread":false},{"title":"cnvnator2VCF.pl <span style='color:#111;'> 5.38KB </span>","children":null,"spread":false},{"title":"Genome.cpp <span style='color:#111;'> 9.13KB </span>","children":null,"spread":false},{"title":"callbaf.py <span style='color:#111;'> 5.35KB </span>","children":null,"spread":false},{"title":"Interval.cpp <span style='color:#111;'> 1.53KB </span>","children":null,"spread":false},{"title":"IO.hh <span style='color:#111;'> 2.84KB </span>","children":null,"spread":false},{"title":"FastaParser.hh <span style='color:#111;'> 833B </span>","children":null,"spread":false},{"title":"plotbaf.py <span style='color:#111;'> 4.30KB </span>","children":null,"spread":false},{"title":"INSTALL <span style='color:#111;'> 3.81KB </span>","children":null,"spread":false},{"title":"EXOnator.cpp <span style='color:#111;'> 12.56KB </span>","children":null,"spread":false},{"title":"IO.cpp <span style='color:#111;'> 14.34KB </span>","children":null,"spread":false},{"title":"Genotyper.cpp <span style='color:#111;'> 3.99KB </span>","children":null,"spread":false},{"title":"Makefile <span style='color:#111;'> 2.34KB </span>","children":null,"spread":false},{"title":"AliParser.cpp <span style='color:#111;'> 5.61KB </span>","children":null,"spread":false},{"title":"VcfParser.hh <span style='color:#111;'> 1.49KB </span>","children":null,"spread":false},{"title":".dockerignore <span style='color:#111;'> 29B </span>","children":null,"spread":false},{"title":"FastaParser.cpp <span style='color:#111;'> 1.09KB </span>","children":null,"spread":false},{"title":"README.md <span style='color:#111;'> 16.08KB </span>","children":null,"spread":false},{"title":"license.rtf <span style='color:#111;'> 1.54KB </span>","children":null,"spread":false},{"title":"Genotyper.hh <span style='color:#111;'> 589B </span>","children":null,"spread":false},{"title":"HisMaker.hh <span style='color:#111;'> 10.08KB </span>","children":null,"spread":false}],"spread":false}],"spread":true}]

评论信息

免责申明

【只为小站】的资源来自网友分享,仅供学习研究,请务必在下载后24小时内给予删除,不得用于其他任何用途,否则后果自负。基于互联网的特殊性,【只为小站】 无法对用户传输的作品、信息、内容的权属或合法性、合规性、真实性、科学性、完整权、有效性等进行实质审查;无论 【只为小站】 经营者是否已进行审查,用户均应自行承担因其传输的作品、信息、内容而可能或已经产生的侵权或权属纠纷等法律责任。
本站所有资源不代表本站的观点或立场,基于网友分享,根据中国法律《信息网络传播权保护条例》第二十二条之规定,若资源存在侵权或相关问题请联系本站客服人员,zhiweidada#qq.com,请把#换成@,本站将给予最大的支持与配合,做到及时反馈和处理。关于更多版权及免责申明参见 版权及免责申明