pybustools:Python函数读取kallisto-bustools格式-源码

上传者: 42098251 | 上传时间: 2021-02-20 12:04:10 | 文件大小: 189KB | 文件类型: ZIP
pybustools 这是通常使用生成的单细胞RNAseq的的python接口。 安装 请注意所需的gmpy2库,它本身依赖于某些c库。 这些可以通过apt-get install libgmp3-dev libgmp-dev libmpfr-dev libmpc-dev安装在ubuntu上。 git clone https://github.com/redst4r/pybustools pip install -e pybustools 用法 from pybustools . pybustools import Bus B = Bus ( folder = '/path/to/bus/output' , bus_name = 'sorted.bus' ) # iterate the records one by one; it yields namedtuples for reco

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