吉布斯采样matlab代码-SparseFactorMixedModel:稀疏因子混合模型
吉布斯采样matlab代码BSFG
丹尼尔·朗西（Sarah
Mukhergee）和丹尼尔·朗西
参考：Runcie，D.和Mukherjee，S.（2013）。
用遗传协方差矩阵的贝叶斯稀疏因子分析剖析高维表型。
遗传学，194（3），753–767。
该软件包是免费软件，您可以根据GNU通用公共许可证（GPL-3）的条款重新分发和/或修改它。
GNU通用公共许可证不允许在专有程序中重新分发此软件。
分发该库是希望它会有用，但没有任何担保；
甚至没有对适销性或特定用途适用性的暗示保证。
版本历史
V1.0
在以下网站上发布了MATLAB版本：
包括Ayroles_et_al_Competitive_fitness，半同胞设计的模拟
应该能够从纸上复制所有分析（直到Gibbs和模拟中的蒙特卡洛误差）
V1.1
固定计算遗传和相互作用的特效。
论文的计算结果和相应的文本缺少$
A
^
{-1}
$。
这应该不会对本文介绍的分析结果产生太大影响，但需要进行检查。
它不会影响Ayroles分析。
V2.0
几乎完全重写了模型代码，但是应该保持相同的功能（我相信）
变量已被重命名以更接近于论文
文件下载
资源详情
[{"title":"（ 58 个子文件 5.18MB ） 吉布斯采样matlab代码-SparseFactorMixedModel:稀疏因子混合模型","children":[{"title":"SparseFactorMixedModel-master","children":[{"title":"BSF-G","children":[{"title":"fast_BSFG_sampler_init.m <span style='color:#111;'> 11.30KB </span>","children":null,"spread":false},{"title":"sample_factors_scores.m <span style='color:#111;'> 417B </span>","children":null,"spread":false},{"title":"draw_simulation_diagnostics.m <span style='color:#111;'> 6.51KB </span>","children":null,"spread":false},{"title":"sample_means.m <span style='color:#111;'> 1.21KB </span>","children":null,"spread":false},{"title":"update_k.m <span style='color:#111;'> 1.97KB </span>","children":null,"spread":false},{"title":"Runcie_Mukherjee_analyses","children":[{"title":"Ayroles_et_al_Competitive_fitness","children":[{"title":"setup.mat <span style='color:#111;'> 830.39KB </span>","children":null,"spread":false}],"spread":true},{"title":"Simulations","children":[{"title":"generate_simulations_halfSib.R <span style='color:#111;'> 9.87KB </span>","children":null,"spread":false},{"title":"Sim_1","children":[{"title":"pedigree.Robj <span style='color:#111;'> 3.73KB </span>","children":null,"spread":false},{"title":"setup.mat <span style='color:#111;'> 1.69MB </span>","children":null,"spread":false}],"spread":true},{"title":"Example_simulation","children":[{"title":"setup.mat <span style='color:#111;'> 483.51KB </span>","children":null,"spread":false}],"spread":true}],"spread":true}],"spread":true},{"title":"sample_F_a.m <span style='color:#111;'> 910B </span>","children":null,"spread":false},{"title":"sample_delta.m <span style='color:#111;'> 724B </span>","children":null,"spread":false},{"title":"sample_Us.m <span style='color:#111;'> 989B </span>","children":null,"spread":false},{"title":"draw_results_diagnostics.m <span style='color:#111;'> 3.46KB </span>","children":null,"spread":false},{"title":"model_setup.m <span style='color:#111;'> 7.70KB </span>","children":null,"spread":false},{"title":"sample_lambda.m <span style='color:#111;'> 1023B </span>","children":null,"spread":false},{"title":"sample_h2s_discrete.m <span style='color:#111;'> 1.02KB </span>","children":null,"spread":false},{"title":"sample_prec_discrete_conditional.m <span style='color:#111;'> 1.29KB </span>","children":null,"spread":false},{"title":"save_posterior_samples.m <span style='color:#111;'> 1.46KB </span>","children":null,"spread":false},{"title":"fast_BSFG_sampler.m <span style='color:#111;'> 12.61KB </span>","children":null,"spread":false},{"title":"Instructions","children":[{"title":"Instructions.log <span style='color:#111;'> 13.48KB </span>","children":null,"spread":false},{"title":"Fly_fig.pdf <span style='color:#111;'> 312.28KB </span>","children":null,"spread":false},{"title":"Instructions.aux <span style='color:#111;'> 1.18KB </span>","children":null,"spread":false},{"title":"Instructions.synctex.gz <span style='color:#111;'> 22.72KB </span>","children":null,"spread":false},{"title":"Instructions.tex <span style='color:#111;'> 7.82KB </span>","children":null,"spread":false},{"title":"Instructions.pdf <span style='color:#111;'> 546.42KB </span>","children":null,"spread":false},{"title":"Sim_fig.pdf <span style='color:#111;'> 191.93KB </span>","children":null,"spread":false}],"spread":false},{"title":"Cor.m <span style='color:#111;'> 208B </span>","children":null,"spread":false},{"title":"clear_Posterior.m <span style='color:#111;'> 924B </span>","children":null,"spread":false},{"title":"CovToCor.m <span style='color:#111;'> 148B </span>","children":null,"spread":false}],"spread":false},{"title":"LICENSE.md <span style='color:#111;'> 34.32KB </span>","children":null,"spread":false},{"title":".gitignore <span style='color:#111;'> 12B </span>","children":null,"spread":false},{"title":"README.md <span style='color:#111;'> 2.09KB </span>","children":null,"spread":false},{"title":"R_BSFG","children":[{"title":"fast_BSFG_sampler_init_fixedlambda.R <span style='color:#111;'> 10.00KB </span>","children":null,"spread":false},{"title":"factor_3Dplot.R <span style='color:#111;'> 3.97KB </span>","children":null,"spread":false},{"title":"setup_pedigree.R <span style='color:#111;'> 1.52KB </span>","children":null,"spread":false},{"title":"plottting_comparing.R <span style='color:#111;'> 3.50KB </span>","children":null,"spread":false},{"title":"Runcie_Mukherjee_analyses","children":[{"title":"Ayroles_et_al_Competitive_fitness","children":[{"title":"setup.mat <span style='color:#111;'> 830.39KB </span>","children":null,"spread":false}],"spread":true},{"title":"Simulations","children":[{"title":"generate_simulations_halfSib.R <span style='color:#111;'> 9.87KB </span>","children":null,"spread":false},{"title":"Sim_1","children":[{"title":"pedigree.Robj <span style='color:#111;'> 3.73KB </span>","children":null,"spread":false},{"title":"setup.mat <span style='color:#111;'> 1.69MB </span>","children":null,"spread":false}],"spread":true},{"title":"Example_simulation","children":[{"title":"setup.mat <span style='color:#111;'> 483.51KB </span>","children":null,"spread":false}],"spread":false}],"spread":true}],"spread":true},{"title":"fast_BSFG_sampler_init_px.R <span style='color:#111;'> 12.06KB </span>","children":null,"spread":false},{"title":"G_matrix_output.R <span style='color:#111;'> 1.60KB </span>","children":null,"spread":false},{"title":"model_setup_px.R <span style='color:#111;'> 2.81KB </span>","children":null,"spread":false},{"title":"model_setup.R <span style='color:#111;'> 3.31KB </span>","children":null,"spread":false},{"title":"Sim_1","children":[{"title":"pedigree.Robj <span style='color:#111;'> 3.73KB </span>","children":null,"spread":false},{"title":"setup.mat <span style='color:#111;'> 1.69MB </span>","children":null,"spread":false}],"spread":false},{"title":"Example_simulation","children":[{"title":"setup.mat <span style='color:#111;'> 483.51KB </span>","children":null,"spread":false}],"spread":false},{"title":"fast_BSFG_sampler_current.R <span style='color:#111;'> 14.45KB </span>","children":null,"spread":false},{"title":"BSFG_functions_c.cpp <span style='color:#111;'> 9.62KB </span>","children":null,"spread":false},{"title":"fast_BSFG_sampler_fixedlambda.R <span style='color:#111;'> 11.03KB </span>","children":null,"spread":false},{"title":"BSFG_functions_px.R <span style='color:#111;'> 13.72KB </span>","children":null,"spread":false},{"title":"fast_BSFG_sampler_init.R <span style='color:#111;'> 11.72KB </span>","children":null,"spread":false},{"title":"fast_BSFG_sampler.R <span style='color:#111;'> 14.19KB </span>","children":null,"spread":false},{"title":"fast_BSFG_sampler_px.R <span style='color:#111;'> 16.07KB </span>","children":null,"spread":false},{"title":"plotting_diagnostics.R <span style='color:#111;'> 14.18KB </span>","children":null,"spread":false},{"title":"BSFG_functions.R <span style='color:#111;'> 17.92KB </span>","children":null,"spread":false}],"spread":false}],"spread":true}],"spread":true}]
评论信息
其他资源
- spire excel word pdf 免费 无水印 8.3.0版本 free
- 广数980td系列2级密码及相关操作
- 中文教程OpenCascade中文教程
- SegmentationClassAug
- windows service 2008流媒体组件包
- 最优化：GMRES算法
- AutoCAD *.dxf文件解析，使用dxflib搞定polyline/spline/ellipse等复杂图形
- 绘制柱状图的C++类（含demo）
- CC1100低功耗例程
- 卡尔曼滤波器的simulink仿真
- HP_Vertica数据库从入门到精通
- NVIDIA-Linux-x86_64-430.50.run
- 基于51单片机的两路相位频率可调方波信号发生器
- 铜浮选泡沫图像局部谱特征提取的新方法
- 基于卡尔曼滤波原理及应用仿真书籍代码仿真
- yuv格式视频计算SSIM值
- sonolib：Sonolib是声音的公共json rest API-源码
- JTG D80-2006 高速公路交通工程及沿线设施设计通用规范.pdf
- pnp4nagios-0.6.25.tar.gz
- 232转485电路图 PCB 和原理图
- WINDOWS内核原理与实现.pdf
- 你好 C++ 中文
- Android应用源码学生信息管理系统项目
- JDK1.8版本64位
- C#项目开发案例全程实录源代码--企业人事管理系统
免责申明
【只为小站】的资源来自网友分享，仅供学习研究，请务必在下载后24小时内给予删除，不得用于其他任何用途，否则后果自负。基于互联网的特殊性，【只为小站】 无法对用户传输的作品、信息、内容的权属或合法性、合规性、真实性、科学性、完整权、有效性等进行实质审查；无论 【只为小站】 经营者是否已进行审查，用户均应自行承担因其传输的作品、信息、内容而可能或已经产生的侵权或权属纠纷等法律责任。
本站所有资源不代表本站的观点或立场，基于网友分享，根据中国法律《信息网络传播权保护条例》第二十二条之规定，若资源存在侵权或相关问题请联系本站客服人员，zhiweidada#qq.com，请把#换成@，本站将给予最大的支持与配合，做到及时反馈和处理。关于更多版权及免责申明参见 版权及免责申明
本站所有资源不代表本站的观点或立场，基于网友分享，根据中国法律《信息网络传播权保护条例》第二十二条之规定，若资源存在侵权或相关问题请联系本站客服人员，zhiweidada#qq.com，请把#换成@，本站将给予最大的支持与配合，做到及时反馈和处理。关于更多版权及免责申明参见 版权及免责申明