seurat/scanpy/stereopy分析10X-HD流程及赛图数据高级分析

[{"title":"（ 55 个子文件 843.02MB ） seurat/scanpy/stereopy分析10X-HD流程及赛图数据高级分析","children":[{"title":"侯尔佳","children":[{"title":"task2","children":[{"title":"pca_elbow_plot.pdf <span style='color:#111;'> 7.35KB </span>","children":null,"spread":false},{"title":"single_circle_Control.pdf <span style='color:#111;'> 93.16KB </span>","children":null,"spread":false},{"title":"spatial_dim.pdf <span style='color:#111;'> 674.37KB </span>","children":null,"spread":false},{"title":"spatial_pseudotime.pdf <span style='color:#111;'> 709.44KB </span>","children":null,"spread":false},{"title":"analysis_workflow_bin50.Rmd <span style='color:#111;'> 18.04KB </span>","children":null,"spread":false},{"title":"nCount_nFeatureScatter.pdf <span style='color:#111;'> 515.18KB </span>","children":null,"spread":false},{"title":"violin_plot.pdf <span style='color:#111;'> 20.08KB </span>","children":null,"spread":false},{"title":"monocle3_trajectory.pdf <span style='color:#111;'> 1.95MB </span>","children":null,"spread":false},{"title":"CellChat_wight.pdf <span style='color:#111;'> 13.51KB </span>","children":null,"spread":false},{"title":"spatial_dim_annotated.pdf <span style='color:#111;'> 664.16KB </span>","children":null,"spread":false},{"title":"CellChat_count.pdf <span style='color:#111;'> 13.79KB </span>","children":null,"spread":false},{"title":"trajectory_genes.pdf <span style='color:#111;'> 973.64KB </span>","children":null,"spread":false},{"title":"CellChat_mat.pdf <span style='color:#111;'> 17.86KB </span>","children":null,"spread":false},{"title":"feature_scatter.pdf <span style='color:#111;'> 1018.00KB </span>","children":null,"spread":false},{"title":"number_of_interactions_Control.pdf <span style='color:#111;'> 6.42KB </span>","children":null,"spread":false},{"title":"nCount_MTscatter.pdf <span style='color:#111;'> 515.96KB </span>","children":null,"spread":false},{"title":"enrichment_plot.pdf <span style='color:#111;'> 31.96KB </span>","children":null,"spread":false},{"title":"annotation.pdf <span style='color:#111;'> 502.21KB </span>","children":null,"spread":false},{"title":"dotplot.pdf <span style='color:#111;'> 7.97KB </span>","children":null,"spread":false},{"title":"umap.pdf <span style='color:#111;'> 499.47KB </span>","children":null,"spread":false}],"spread":false},{"title":"tsak1","children":[{"title":"Stereopy","children":[{"title":"stereopy10xHD_umap.pdf <span style='color:#111;'> 2.50MB </span>","children":null,"spread":false},{"title":"SquareBin_Clustering.ipynb <span style='color:#111;'> 4.08MB </span>","children":null,"spread":false},{"title":"stereopy10xHD_highly_variable_genes.pdf <span style='color:#111;'> 727.96KB </span>","children":null,"spread":false},{"title":"stereopy10xHD_elbow.pdf <span style='color:#111;'> 12.75KB </span>","children":null,"spread":false},{"title":"SquareBin_Clustering.html <span style='color:#111;'> 2.58MB </span>","children":null,"spread":false},{"title":"stereopy10xHD_spatial_scatter.pdf <span style='color:#111;'> 1.65MB </span>","children":null,"spread":false},{"title":"stereopy10xHD_genes_count.pdf <span style='color:#111;'> 2.04MB </span>","children":null,"spread":false},{"title":"stereopy10xHD_panorama_umap.pdf <span style='color:#111;'> 1.11MB </span>","children":null,"spread":false},{"title":"stereopy10xHD_spatial_leiden_cluster_scatter.pdf <span style='color:#111;'> 532.00KB </span>","children":null,"spread":false},{"title":"stereopy10xHD_panorama_cluster_scatter.pdf <span style='color:#111;'> 584.03KB </span>","children":null,"spread":false},{"title":"stereopy10xHD_cluster_scatter.pdf <span style='color:#111;'> 529.67KB </span>","children":null,"spread":false},{"title":"stereopy10xHD_violin.pdf <span style='color:#111;'> 15.74KB </span>","children":null,"spread":false},{"title":"stereopy10xHD_panorama_louvain_cluster_scatter.pdf <span style='color:#111;'> 574.98KB </span>","children":null,"spread":false}],"spread":false},{"title":"seurat","children":[{"title":"HD_vignette.html <span style='color:#111;'> 637.11KB </span>","children":null,"spread":false},{"title":"HD_vignette.Rmd <span style='color:#111;'> 16.99KB </span>","children":null,"spread":false},{"title":"plotset","children":[{"title":"016um_SpatialFeaturePlot.pdf <span style='color:#111;'> 6.61MB </span>","children":null,"spread":false},{"title":"nCount_Spatial.008um_SpatialFeaturePlot.pdf <span style='color:#111;'> 6.46MB </span>","children":null,"spread":false},{"title":"SpatialDimPlot.pdf <span style='color:#111;'> 26.57MB </span>","children":null,"spread":false},{"title":"nCount_Spatial.008um_violin.pdf <span style='color:#111;'> 191.16KB </span>","children":null,"spread":false},{"title":"DoHeatmap_Spatial.008um.pdf <span style='color:#111;'> 2.45MB </span>","children":null,"spread":false},{"title":"umap.sketch.pdf <span style='color:#111;'> 586.37KB </span>","children":null,"spread":false},{"title":"full_umap_sketch.pdf <span style='color:#111;'> 112.79KB </span>","children":null,"spread":false},{"title":"008um_SpatialFeaturePlot.pdf <span style='color:#111;'> 25.13MB </span>","children":null,"spread":false},{"title":"banksy_cells_SpatialDimPlot.pdf <span style='color:#111;'> 698.80MB </span>","children":null,"spread":false},{"title":"cluster_SpatialDimPlot.pdf <span style='color:#111;'> 113.13MB </span>","children":null,"spread":false},{"title":"banksy_cluster_SpatialDimPlot.pdf <span style='color:#111;'> 30.06MB </span>","children":null,"spread":false}],"spread":false}],"spread":true},{"title":"scanpy","children":[{"title":"scanpy_plot","children":[{"title":"spatial.pdf <span style='color:#111;'> 1.17KB </span>","children":null,"spread":false},{"title":"cluster_spatial.pdf <span style='color:#111;'> 1.17KB </span>","children":null,"spread":false},{"title":"Sst_Npy_spatial.pdf <span style='color:#111;'> 1.17KB </span>","children":null,"spread":false},{"title":"heatmap.pdf <span style='color:#111;'> 1.17KB </span>","children":null,"spread":false},{"title":"ordered_spatial.pdf <span style='color:#111;'> 1.17KB </span>","children":null,"spread":false},{"title":"cluster_Vgf_spatial.pdf <span style='color:#111;'> 1.17KB </span>","children":null,"spread":false},{"title":"histplot.pdf <span style='color:#111;'> 19.36KB </span>","children":null,"spread":false},{"title":"umap.pdf <span style='color:#111;'> 1.17KB </span>","children":null,"spread":false}],"spread":true},{"title":"tutorial_visium_hne.ipynb <span style='color:#111;'> 3.73MB </span>","children":null,"spread":false}],"spread":true}],"spread":true}],"spread":true}],"spread":true}]